BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A12SP1|AL429678
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1388 1746 0.0
>3x_Contig1388
Length = 8256
Score = 1746 bits (880), Expect = 0.0
Identities = 881/882 (99%)
Strand = Plus / Plus
Query: 1 gatcaccttcaaaccacacatagcagcagaggcggggtttgtaccatgtgcagagacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 gatcaccttcaaaccacacatagcagcagaggcggggtttgtaccatgtgcagagacagg 1863
Query: 61 gatcaaacatatgttacggtgggtttctccgcggtcttcgaagtatcttctgatgactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 gatcaaacatatgttacggtgggtttctccgcggtcttcgaagtatcttctgatgactct 1923
Query: 121 aagaccagcgtattcaccttgagctccagagtttggttgtwatgaaacttcatcgaatcc 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1924 aagaccagcgtattcaccttgagctccagagtttggttgtaatgaaacttcatcgaatcc 1983
Query: 181 ggtaatagatgcaagatctttttccaagtttttgatcaaaacctcgtatccttccacttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1984 ggtaatagatgcaagatctttttccaagtttttgatcaaaacctcgtatccttccacttg 2043
Query: 241 atcccttggttggaatggatggatattggcaaactgtggccaggtgattggaatcatctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2044 atcccttggttggaatggatggatattggcaaactgtggccaggtgattggaatcatctc 2103
Query: 301 gacagttgcattcaacttcatggtacatgatccaagtgggatcattgagtttgccaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2104 gacagttgcattcaacttcatggtacatgatccaagtgggatcattgagtttgccaaaga 2163
Query: 361 taaatcacgggattgtagacggtgtaagtatcttagcattgctgtctcagaatgatgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2164 taaatcacgggattgtagacggtgtaagtatcttagcattgctgtctcagaatgatgagt 2223
Query: 421 gttgaacacctcattggacaagatttcatcttgacgggtcaattcttgcgggaactctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2224 gttgaacacctcattggacaagatttcatcttgacgggtcaattcttgcgggaactctgg 2283
Query: 481 aagtgctactggcaattcattggcgttgcatccgaataattcgagtagggcgatcaaatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2284 aagtgctactggcaattcattggcgttgcatccgaataattcgagtagggcgatcaaatc 2343
Query: 541 atctttggtgacagtttcgtcaagagataatgaaacggtttcattattgacttggtataa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2344 atctttggtgacagtttcgtcaagagataatgaaacggtttcattattgacttggtataa 2403
Query: 601 attgatttgatatttgtcgaccgcagtctttatgaaatcttgtgcggagattccgtttaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2404 attgatttgatatttgtcgaccgcagtctttatgaaatcttgtgcggagattccgtttaa 2463
Query: 661 ctcaacagtcaaagtatcaaaccacgatttgttcaacaaagtatggtttgaagatgataa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2464 ctcaacagtcaaagtatcaaaccacgatttgttcaacaaagtatggtttgaagatgataa 2523
Query: 721 cccattggccaatacggttgtgaatccgtaaactctgccagcaatttcttttagaccttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2524 cccattggccaatacggttgtgaatccgtaaactctgccagcaatttcttttagaccttg 2583
Query: 781 tgggccatggtaaacacagtagtttgcagcaatattagccaagagcgcttgtgcagtaca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2584 tgggccatggtaaacacagtagtttgcagcaatattagccaagagcgcttgtgcagtaca 2643
Query: 841 aatatttgaagtagccttatcacgcttgatgtgttgctctct 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2644 aatatttgaagtagccttatcacgcttgatgtgttgctctct 2685
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6326
Number of Sequences: 1807
Number of extensions: 6326
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)